The Perfect Server - CentOS 5.3 x86_64 [ISPConfig 3] - Page 5

14 Set MySQL Passwords And Configure phpMyAdmin

Start MySQL:

chkconfig --levels 235 mysqld on
/etc/init.d/mysqld start

Then set passwords for the MySQL root account:

mysqladmin -u root password yourrootsqlpassword
mysqladmin -h -u root password yourrootsqlpassword

Now we configure phpMyAdmin. We change the Apache configuration so that phpMyAdmin allows connections not just from localhost (by commenting out the <Directory "/usr/share/phpmyadmin"> stanza):

vi /etc/httpd/conf.d/phpmyadmin.conf

#  Web application to manage MySQL

#<Directory "/usr/share/phpmyadmin">
#  Order Deny,Allow
#  Deny from all
#  Allow from

Alias /phpmyadmin /usr/share/phpmyadmin
Alias /phpMyAdmin /usr/share/phpmyadmin
Alias /mysqladmin /usr/share/phpmyadmin

Next we change the authentication in phpMyAdmin from cookie to http:

vi /usr/share/phpmyadmin/

/* Authentication type */
$cfg['Servers'][$i]['auth_type'] = 'http';

Then we create the system startup links for Apache and start it:

chkconfig --levels 235 httpd on
/etc/init.d/httpd start

Now you can direct your browser to or and log in with the user name root and your new root MySQL password.


15 Install Amavisd-new, SpamAssassin And ClamAV

To install amavisd-new, spamassassin and clamav, run the following command:

yum install amavisd-new spamassassin clamav clamd unzip bzip2 unrar perl-DBD-mysql

Then we start freshclam, amavisd, and clamd...

chkconfig --levels 235 amavisd on
chkconfig --levels 235 clamd on
/etc/init.d/amavisd start
/etc/init.d/clamd start

... and create some necessary directories:

mkdir /var/run/amavisd /var/spool/amavisd /var/spool/amavisd/tmp /var/spool/amavisd/db
chown amavis /var/run/amavisd /var/spool/amavisd /var/spool/amavisd/tmp /var/spool/amavisd/db


16 Installing Apache2 With mod_php, mod_fcgi/PHP5, And suPHP

ISPConfig 3 allows you to use mod_php, mod_fcgi/PHP5, cgi/PHP5, and suPHP on a per website basis.

mod_fcgid is not available in the official CentOS repositories, but there's a package for CentOS 5.x in the testing repository. We enable the repository as follows:

cd /etc/yum.repos.d/

Next we open /etc/yum.repos.d/kbsingh-CentOS-Extras.repo...

vi /etc/yum.repos.d/kbsingh-CentOS-Extras.repo

... and set gpgcheck to 0 and enabled to 1 in the [kbs-CentOS-Testing] section:

name=CentOS.Karan.Org-EL$releasever - Testing

Afterwards we can install Apache2with mod_php5, mod_fcgid, and PHP5:

yum install php php-devel php-gd php-imap php-ldap php-mysql php-odbc php-pear php-xml php-xmlrpc php-eaccelerator php-mbstring php-mcrypt php-mhash php-mssql php-snmp php-soap php-tidy curl curl-devel perl-libwww-perl ImageMagick libxml2 libxml2-devel mod_fcgid php-cli httpd-devel

Next we open /etc/php.ini...

vi /etc/php.ini

... and change the error reporting (so that notices aren't shown any longer) and add cgi.fix_pathinfo = 1 at the end of the file:

;error_reporting  =  E_ALL
error_reporting = E_ALL & ~E_NOTICE
cgi.fix_pathinfo = 1

Next we install suPHP:

cd /tmp
tar xvfz suphp-0.7.1.tar.gz
cd suphp-0.7.1/
./configure --prefix=/usr --sysconfdir=/etc --with-apr=/usr/bin/apr-1-config --with-apxs=/usr/sbin/apxs --with-apache-user=apache --with-setid-mode=owner --with-php=/usr/bin/php-cgi --with-logfile=/var/log/httpd/suphp_log --enable-SUPHP_USE_USERGROUP=yes
make install

Then we add the suPHP module to our Apache configuration...

vi /etc/httpd/conf.d/suphp.conf

LoadModule suphp_module modules/

... and create the file /etc/suphp.conf as follows:

vi /etc/suphp.conf

;Path to logfile


;User Apache is running as

;Path all scripts have to be in

;Path to chroot() to before executing script

; Security options

;Check wheter script is within DOCUMENT_ROOT

;Send minor error messages to browser

;PATH environment variable

;Umask to set, specify in octal notation

; Minimum UID

; Minimum GID

;Handler for php-scripts

;Handler for CGI-scripts

Finally we restart Apache:

/etc/init.d/httpd restart


17 Install PureFTPd

PureFTPd can be installed with the following command:

yum install pure-ftpd

Then create the system startup links and start PureFTPd:

chkconfig --levels 235 pure-ftpd on
/etc/init.d/pure-ftpd start


18 Install MyDNS

There's no MyDNS rpm package for the x86_64 architecture, and building MyDNS from the sources on CentOS 5.3 x86_64 fails because of some incompatibilities with the mysql-devel package. Therefore we install the MyDNS rpm package for i386 which works on x86_64 as well:

rpm -ivh mydns-mysql-1.1.0-1.i386.rpm

When the system boots, MyDNS must be started after MySQL. The MySQL startup link has the priority 64 on CentOS, so the MyDNS startup link must have a priority between 65 and 99. Therefore we open the MyDNS init script...

vi /etc/init.d/mydns

... and change

# chkconfig: 345 52 50


# chkconfig: 345 65 50

Then we create the startup links:

chkconfig --levels 235 mydns on

We don't start MyDNS now because it must be configured first - this will be done automatically by the ISPConfig 3 installer later on.


19 Install Vlogger And Webalizer

Vlogger and webalizer can be installed as follows:

yum install webalizer perl-DateTime-Format-HTTP perl-DateTime-Format-Builder

cd /tmp
tar xvfz vlogger-1.3.tar.gz
mv vlogger-1.3/vlogger /usr/sbin/
rm -rf vlogger*


20 Install Jailkit

Jailkit is needed only if you want to chroot SSH users. It can be installed as follows (important: Jailkit must be installed before ISPConfig - it cannot be installed afterwards!):

cd /tmp
tar xvfz jailkit-2.5.tar.gz
cd jailkit-2.5
make install
rm -rf jailkit-2.5*


21 Install fail2ban

This is optional but recommended, because the ISPConfig monitor tries to show the log:

yum install fail2ban

chkconfig --levels 235 fail2ban on
/etc/init.d/fail2ban start


22 Install rkhunter

rkhunter can be installed as follows:

yum install rkhunter

Share this page:

5 Comment(s)

Add comment


From: Jose


 You explain here the instllation of MyDNS 1.1.0 ( but the newest version is

 Is good the last one or is better to use 1.1.0 from

 Thank you

From: Anonymous

If you are doing this on your local machine it is imperative that you add -p to the second command:

mysqladmin -u root password yourrootsqlpassword
mysqladmin -h -u root password yourrootsqlpassword -p

as you will be actually connecting from the localhost for which you already set the password above.

From: Anonymous

check your /etc/hosts

From: Simon Barrett

This happened for me and I was searching high and low for answers.

 I eventually found out via the "/var/log/httpd/error_log" output (open it in vi) that access was denied to the following file:


 I browsed to that directory but found that the "vlogger" directory did not exist.

I put in the following command: "mkdir /usr/sbin/vlogger" 

I then retried  starting apache with the "/etc/init.d/httpd start" command and it worked.

 I can now browse to the server via HTTP from my client computers again.

 Hope this was helpful


I have jammed in this step:

  • mysqladmin -u root password yourrootsqlpassword
  • mysqladmin -h -u root password yourrootsqlpassword


The first command has successed, but second one has failed as following message:

  • mysqladmin: connect to server at '' failed
  • error: 'Host '' is not allowed to connect to this MySQL server'


Of course, I have replaced the '' with the server name which has been designated in /etc/hosts setup. And my 'rootsqlpassword' also same as the first command.

 Is there anything I missed? and how can I fix it? May I ignore this error and go forward?