i guest this is the script that runs webalizer each night:
[root@server1 ~]# cat /etc/cron.daily/00webalizer
# update access statistics for the web site
if [ -s /var/log/httpd/access_log ]; then
exec /usr/bin/webalizer -Q
If i run it my self it will take some time to finish and will only update the stats in the /var/www/usage/ folder.
no files in the .../stats folder are created at all.