I completed a fresh install of ISPconfig 3.5 on Debian 6.
All seems to work well.
I had to enable phpMyadmin by following this thread http://www.howtoforge.com/forums/showthread.php?t=32617
I created a new database user and was unable to log in with that user. Ive only be able to log in with ROOT. Have i missed something really simple
Also i think the alias links have interfered with webmail somehow....