ProFTP is causing issues for me as well during the upgrade from 6.06 to 8.04
Disclaimer: I have done the Perfect Server set-up on a test system without actually installing ISPConfig
So one of my servers might actually work with a few tweaks, the other on unfurtunately is a 6.10 server which I have to take to 7.04 and 7.10 before upgrading to 8.04, which sounds way to risky to me.
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